We welcome your ideas for improvement and feedback; contact us at NIAID SNP Explorer Support (email).
Analysis and visualization of hyper-igm/cvid re-sequencing microarray data
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SNP Explorer is a Web-based application used for the visualization and analysis of SNPs from custom Affymetrix resequencing Hyper-IgM/CVID microarrays. The application helps in the high-throughput discovery of novel mutations among hundreds of disease-relevant genes in patients with Hyper-IgM/CVID or other primary immunodeficiency diseases.
This software is provided free of charge by the National Institute of Allergy and Infectious Diseases.
The Web interface of SNP Explorer was developed using the latest BioGraphics Perl library. The gene and the known SNP information were extracted from UCSC genome database annotations. With further development, the SNP Explorer framework can be adapted for processing any resequencing array data.
Last Updated March 20, 2012
Last Reviewed June 17, 2010