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NIAID > Labs & Scientific Resources > Resources for Researchers > Bioinformatics

Data Publishing and Format

Epitopes and MHC/HLA

Gene Expression and Transcriptome Analysis

Genomic and DNA Analysis

Multi-Resource Portals

Mutation, Recombination, and SNP

Phylogenetics and Ontology

Proteomics and Protein Analysis

Systems Biology

By Health/Disease Topics

Selected Bioinformatics Publications

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Bioinformatics

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Bioinformatics Resources by Health/Disease Topics

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Allergy, Immunology, and Transplantation

Analytical and Computational Tools

Center for Human Immunology, Autoimmunity and Inflammation
Flow Cytometry Analysis Component (FLOCK)
Gene Pattern (iGene Pattern)
Human Immunology Project Consortium
Immune Epitope Database and Analysis Resource (IEDB)
- B Cell Epitope Prediction Tools
- T Cell Epitope Prediction Tools
Immunology Database and Analysis Portal (ImmPORT)
JOINSOLVER

Databases, Data Sets, and Ontologies

Database of Mutations Causing Human Hyper Ige Syndrome (STAT3base)
Immune Epitope Database and Analysis Resource (IEDB)
Immunology Database and Analysis Portal (ImmPORT)
Systems Approach to Immunology
- Computational Core
- Signaling Core

Visualization and Modeling Tools

Center for Human Immunology, Autoimmunity and Inflammation
Immunology Database and Analysis Portal
Modeling Immunity for Biodefense

HIV/AIDS

Analytical and Computational Tools

HIV Database

Databases, Data Sets, and Ontologies

HIV Databases

Visualization and Modeling Tools

HIV Database

Infectious Diseases

Analytical and Computational Tools

EuPathDB BLAST
Influenza Research Database (IRD)
Pathosystems Resource Integration Center (PATRIC)
Virus Pathogen Resource (ViPR)

Databases, Data Sets, and Ontologies

EuPathDB
- Search
- Sequence Retrieval
Influenza Research Database (IRD)
Pathosystems Resource Integration Center (PATRIC)
Virus Pathogen Resource (ViPR): search for genomes, genes and proteins, immune epitopes, and 3D protein structures

Visualization and Modeling Tools

Host Pathogen Interactions
Virus Pathogen Resource (ViPR)
- Visualize Aligned Sequences
Influenza Research Database (IRD)
- Visualize Aligned Sequences
- Infer Phylogenetic Relationships and Generate Trees
3D Reconstruction Via Stereoscopy for the Study of Mosquito Swarms
Papillomavirus Episteme (PaVE)

Last Updated January 24, 2013

Last Reviewed April 23, 2012

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