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FungiDB, one of the NIAID-funded Bioinformatics Resource Centers, is an integrated genomic and functional genomic database for the kingdom Fungi.

FungiDB integrates whole genome sequence and annotation and also includes experimental and environmental isolate sequence data. The database includes comparative genomics, analysis of gene expression, and supplemental bioinformatics analyses and a web interface for data-mining.

Main Areas of Focus

  • Comparative genomics
  • Analysis of gene expression
  • Supplemental bioinformatics
  • Web-based data-mining


  • Whole genome sequence and annotation
  • Experimental and environmental isolate sequence data
  • Analysis and annotation tools and tutorials

Who Can Use This Resource

  • Freely and publicly available to the scientific community

How To Get Started

  • Register for a free account on the FungiDB website
Content last reviewed on November 17, 2017