Resources for Researchers

NIAID offers many resources to support your research, including reagents, model organisms, and tissue samples, to name just a few. Use the filters under Filter Search Results to narrow your search, or simply enter specific search terms in the search field.

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  • Genomic Centers for Infectious Diseases (GCID) Resources

    The GCID use and develop or improve innovative applications of genomic technologies, such as RNA sequencing and metagenomics, and provide rapid and cost-efficient production of high-quality genome sequences of microorganisms, invertebrate vectors of infectious diseases, and hosts and host...

    coanstevensje@nih.gov - 2017-08-22 17:18

  • Virus Pathogen Resource (ViPR)

    The Virus Pathogen Resource (ViPR), one of the NIAID-funded Bioinformatics Resource Centers, is a publicly available one-stop database and analysis resource that supports the research of viral pathogens in the NIAID Category A-C Priority Pathogen lists and those causing (re)emerging infectious...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • VectorBase

    VectorBase, one of the NIAID-funded Bioinformatics Resource Centers (BRC), provides genomic, phenotypic and population-centric data to the scientific community for invertebrate vectors of human pathogens....

    coanstevensje@nih.gov - 2017-08-28 15:27

  • PATRIC (Bacterial Bioinformatics Resource Center)

    PATRIC, one of the NIAID-funded Bioinformatics Resource Centers, is an information system designed to support the biomedical research community’s work on bacterial infectious diseases via integration of vital pathogen information with rich data and analysis tools. PATRIC sharpens and hones the...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • Influenza Research Database (IRD)

    The IRD, one of the NIAID-funded Bioinformatics Resource Centers, provides a suite of tools for analysis of all types of influenza data and a personal work bench on which each scientist can store lists of important data selected from that available on IRD....

    coanstevensje@nih.gov - 2017-08-28 15:27

  • Orfeome

    The Orfeome Project is part of the NIAID-supported Functional Genomics Program. The project is a collaboration of immunolgy and RNA/DNA virus pathogenesis experts, working together to address the hypothesis that RNA and DNA viruses encode common and unique mechanisms to manipulate virus replication...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • Genes Unknown in Acinetobacter baumannii (GUNK)

    GUNK center is part of the NIAID Functional Genomics Program. This center was created to investigate the role of previously uncharacterized genes of A. baumannii in its ability to cause human disease. Three projects have been established to: Use a genomic approach to broadly identify the role of...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • FungiDB

    FungiDB, one of the NIAID-funded Bioinformatics Resource Centers, is an integrated genomic and functional genomic database for the kingdom Fungi. FungiDB integrates whole genome sequence and annotation and also includes experimental and environmental isolate sequence data. The database includes...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • Functional Lists of Unknown TB Entities (FLUTE)

    FLUTE is a Functional Genomics Center funded by NIAID, with the goal of discovering the roles of genes from Mtb with previously unknown functions. In addition FLUTE aims to establish an efficient pathway for identifying gene function that could serve as a paradigm for other bacterial species....

    coanstevensje@nih.gov - 2017-08-28 15:27

  • Eukaryotic Pathogen Database Resources (EuPathDB)

    EuPathDB, one of the NIAID-funded Bioinformatics Resource Centers, is an integrated database covering eukaryotic pathogens. While these organisms are supported by a taxon-specific database/website built upon the same infrastructure, the EuPathDB portal offers an entry point to all of these...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • Chicago Center for Functional Annotation (CCFA)

    The Chicago Center for Functional Annotation (CCFA) is defining gene function on multiple scales, using a multi-disciplinary set of cellular, genetic, molecular, and biochemical approaches. The primary goal of the CCFA is to define the biochemical and cellular functions of uncharacterized genes in...

    coanstevensje@nih.gov - 2017-08-28 15:27

  • HIV Drug Development: Preclinical Pharmacology and Toxicology Services

    This service can be used to provide pharmacokinetic and safety assessments of products in mice, rats, rabbits, dogs, and nonhuman primates....

    coanstevensje@nih.gov - 2017-08-28 15:27

  • ACTG Network Laboratory (ACTG NL)

    The ACTG NL consists of Core Laboratory groups in immunology, pharmacology, virology and TB. Each Core Laboratory Group is comprised of several Specialty Laboratories that provide a broad range of assays and services required to conduct the scientific agenda of the ACTG and to complement laboratory...

    coanstevensje@nih.gov - 2017-08-29 17:42

  • Heterogeneity in Human Immune Cells

    Heterogeneity in Human Immune Cells is a website providing interactive figures (iFigs) for a recent study of protein expression heterogeneity in human immune cells conducted by Dr. John Tsang's group (Systems Genomics and Bioinformatics Unit) at the Laboratory of Immune System Biology, National...

    coanstevensje@nih.gov - 2017-08-30 12:45

  • JOINSOLVER

    JOINSOLVER is a web-based software program developed for human immunoglobulin V(D)J recombination analysis, and created by the National Institutes of Health, National Institute of Arthritis and Musculosketelal and Skin Diseases (NIAMS) and the Center for Information Technology (CIT). JOINSOLVER...

    coanstevensje@nih.gov - 2017-09-07 14:52

  • Nephele

    Nephele is a microbiome analysis engine which brings together microbiome data and analysis tools in a cloud computing environment. It offers robust, multi-step microbiome analysis pipelines, with no setup time or cost....

    coanstevensje@nih.gov - 2017-09-07 14:52

  • Structural Genomics Centers for Infectious Diseases: Resources

    The Structural Genomics Centers for Infectious Diseases provide the research community with: 3-D protein structures and protein-ligand complexes Sequence-verified clones and peptides Services that deliver requested 3-D structure determination Molecular screening of proteins in complex with...

    coanstevensje@nih.gov - 2017-09-08 14:17

  • Bioinformatics and Computational Biosciences Branch Services

    The Bioinformatics and Computational Biosciences Branch (BCBB) offers a suite of scientific services and resources for the NIAID research community and its collaborators. BCBB provides expertise and computational solutions to researchers at all levels of experience. Computational biologists...

    coanstevensje@nih.gov - 2017-09-21 15:27

  • NIAID Microbiome Program: Sequencing

    NIAID’s microbiome sequencing facility studies the structure and function of the microbiome associated with various hosts and body sites. This facility has one dedicated staff member and is equipped with an Ilumina MiSeq, which can sequence whole genomes or specific amplicons. Whole genome...

    coanstevensje@nih.gov - 2017-09-21 16:15

  • Biocontainment Laboratory: George Mason University National Center for Biodefense and Infectious Diseases

    The George Mason University National Center for Biodefense and Infectious Diseases Biomedical Research Laboratory (BRL) is one of the NIAID-supported Biocontainment Laboratories. The RBL supports research programs in the National Center for Biodefense and Infectious Diseases focusing on host...

    coanstevensje@nih.gov - 2017-10-11 13:36

  • Biocontainment Laboratory: University of Texas Medical Branch Galveston National Laboratory

    As one of two National Biocontainment Laboratories constructed under grants awarded by the National Institute of Allergy and Infectious Diseases/National Institutes of Health (NIAID/NIH), the Galveston National Laboratory (GNL) enables progress in our understanding of the fundamental mechanisms...

    coanstevensje@nih.gov - 2017-10-11 13:36

  • QuSAGE: Quantitative Set Analysis for Gene Expression

    This Gene Set Enrichment-type test designed for analysis of microarray and RNASeq data is designed to provide a faster, more accurate, and easier to understand test for gene expression studies. QuSAGE extends previous methods with a complete probability density function (PDF). From this PDF, P...

    coanstevensje@nih.gov - 2018-02-12 19:02

  • Immcantation Portal

    The Immcantation framework is developed as a start-to-finish analytical ecosystem for large-scale characterization of B cell receptor (BCR) and T cell receptor (TCR) repertoires from high-throughput adaptive immune receptor repertoire sequencing (AIRR-seq) datasets. Immcantation provides Python and...

    Zshad - 2018-04-18 13:45

  • NIAID Bioinformatics Portal

    The portal brings together some exciting features including: links to BCBB’s training resources; a section of scripts, code, and programs created by NIAID researchers downloadable from GitHub; and a curated calendar of events with entries focused on bioinformatics and computational biology....

    Zshad - 2018-05-24 11:05

  • Systems Biology Consortium Resources

    The Systems Biology Consortium for Infectious Diseases is a community of systems biologists who aim to integrate experimental biology and computational tools and modeling across temporal and spatial scales towards a better understanding of infectious diseases. Through a collaborative effort,...

    assefamh@nih.gov - 2018-07-26 14:28