The Immcantation framework is developed as a start-to-finish analytical ecosystem for large-scale characterization of B cell receptor (BCR) and T cell receptor (TCR) repertoires from high-throughput adaptive immune receptor repertoire sequencing (AIRR-seq) datasets. Immcantation provides Python and R packages for pre-processing of raw sequencing reads, population structure determination, and repertoire analysis.
More information about this resource is available at Immcantation Portal
Main Areas of Focus
- A complete software package for analysis of adaptive immune receptor repertoire sequencing (AIRR-seq) datasets
Tools
- Source code for the software is made available to investigators.
Eligibility Criteria
- None
Contact Information
Gang Dong, M.D., Ph.D., Asthma and Airway Biology Section, Division of Allergy, Immunology, and Transplantation