The Immcantation framework is developed as a start-to-finish analytical ecosystem for large-scale characterization of B cell receptor (BCR) and T cell receptor (TCR) repertoires from high-throughput adaptive immune receptor repertoire sequencing (AIRR-seq) datasets. Immcantation provides Python and R packages for pre-processing of raw sequencing reads, population structure determination, and repertoire analysis.
More information about this resource is available at Immcantation Portal
Main Areas of Focus
- A complete software package for analysis of adaptive immune receptor repertoire sequencing (AIRR-seq) datasets
- Source code for the software is made available to investigators for download at the site listed below.
Gang Dong, M.D., Ph.D., Airway inflammation