Immcantation Portal

The Immcantation framework is developed as a start-to-finish analytical ecosystem for large-scale characterization of B cell receptor (BCR) and T cell receptor (TCR) repertoires from high-throughput adaptive immune receptor repertoire sequencing (AIRR-seq) datasets. Immcantation provides Python and R packages for pre-processing of raw sequencing reads, population structure determination, and repertoire analysis.

Main Areas of Focus

  • A complete software package for analysis of adaptive immune receptor repertoire sequencing (AIRR-seq) datasets

Tools

  • Source code for the software is available to investigators for download on the Immcantation website

Who Can Use This Resource

  • Available for public use
Content last reviewed on April 18, 2018